Package index • jcc

All functions
`calculateJCCScores()`	Calculate scaled coverages and JCC scores
`combineCoverages()`	Combine observed and predicted coverages
`fitAlpineBiasModel()`	Fit fragment bias model with alpine
`gthr()`	Weight function
`junctionScore()`	Help function for JCC score calculation
`plotGeneSummary()`	Plot JCC score summary for a given gene
`predictTxCoverage()`	Predict coverage profiles of transcripts
`scaleTxCoverages()`	Scale transcript coverages by abundance estimate
`scaledCoverage()`	Help function for calculation of scaled junction coverages

Reference