Package index • DuoClustering2018

All functions
`DuoClustering2018`	DuoClustering2018
`ari_df()`	Help function for computing ARI
`clustering_summary_filteredExpr10_Koh_v1()`	Clustering summaries
`clustering_summary_filteredExpr10_Koh_v2()`	Clustering summaries
`duo_clustering_all_parameter_settings_v1()`	Hyperparameter values
`duo_clustering_all_parameter_settings_v2()`	Hyperparameter values
`plot_entropy()`	Plot entropy of cluster assignments
`plot_k_diff()`	Plot differences between optimal, estimated and true number of clusters
`plot_performance()`	Plot performance of clustering methods
`plot_stability()`	Plot stability of methods
`plot_timing()`	Plot timing of methods
`sce_full_Koh()` `sce_filteredExpr10_Koh()` `sce_filteredHVG10_Koh()` `sce_filteredM3Drop10_Koh()` `sce_full_KohTCC()` `sce_filteredExpr10_KohTCC()` `sce_filteredHVG10_KohTCC()` `sce_filteredM3Drop10_KohTCC()`	Koh data sets
`sce_full_Kumar()` `sce_filteredExpr10_Kumar()` `sce_filteredHVG10_Kumar()` `sce_filteredM3Drop10_Kumar()` `sce_full_KumarTCC()` `sce_filteredExpr10_KumarTCC()` `sce_filteredHVG10_KumarTCC()` `sce_filteredM3Drop10_KumarTCC()`	Kumar data sets
`sce_full_SimKumar4easy()` `sce_filteredExpr10_SimKumar4easy()` `sce_filteredHVG10_SimKumar4easy()` `sce_filteredM3Drop10_SimKumar4easy()` `sce_full_SimKumar4hard()` `sce_filteredExpr10_SimKumar4hard()` `sce_filteredHVG10_SimKumar4hard()` `sce_filteredM3Drop10_SimKumar4hard()` `sce_full_SimKumar8hard()` `sce_filteredExpr10_SimKumar8hard()` `sce_filteredHVG10_SimKumar8hard()` `sce_filteredM3Drop10_SimKumar8hard()`	SimKumar data sets
`sce_full_Trapnell()` `sce_filteredExpr10_Trapnell()` `sce_filteredHVG10_Trapnell()` `sce_filteredM3Drop10_Trapnell()` `sce_full_TrapnellTCC()` `sce_filteredExpr10_TrapnellTCC()` `sce_filteredHVG10_TrapnellTCC()` `sce_filteredM3Drop10_TrapnellTCC()`	Trapnell data sets
`sce_full_Zhengmix4eq()` `sce_filteredExpr10_Zhengmix4eq()` `sce_filteredHVG10_Zhengmix4eq()` `sce_filteredM3Drop10_Zhengmix4eq()` `sce_full_Zhengmix4uneq()` `sce_filteredExpr10_Zhengmix4uneq()` `sce_filteredHVG10_Zhengmix4uneq()` `sce_filteredM3Drop10_Zhengmix4uneq()` `sce_full_Zhengmix8eq()` `sce_filteredExpr10_Zhengmix8eq()` `sce_filteredHVG10_Zhengmix8eq()` `sce_filteredM3Drop10_Zhengmix8eq()`	Zheng data sets
`shannon_entropy()`	Calculate Shannon entropy

Reference

All functions