Print a list of all *.createRmd functions that are available in the search path. These functions can be used together with the runDiffExp function to perform differential expression analysis. Consult the help pages for the respective functions for more information.

listcreateRmd()

Author

Charlotte Soneson

Examples

listcreateRmd()
#>  [1] "DESeq2.createRmd"               "DESeq2.length.createRmd"       
#>  [3] "DSS.createRmd"                  "EBSeq.createRmd"               
#>  [5] "NBPSeq.createRmd"               "NOISeq.prenorm.createRmd"      
#>  [7] "TCC.createRmd"                  "edgeR.GLM.createRmd"           
#>  [9] "edgeR.exact.createRmd"          "lengthNorm.limma.createRmd"    
#> [11] "lengthNorm.sva.limma.createRmd" "logcpm.limma.createRmd"        
#> [13] "phylolm.createRmd"              "sqrtcpm.limma.createRmd"       
#> [15] "ttest.createRmd"                "voom.limma.createRmd"          
#> [17] "voom.ttest.createRmd"