2025
- Reproducible research in computational biology, University of Basel/FMI, Switzerland
- Introduction to R, University of Basel, Switzerland
- Graphical representation of data, FMI, Switzerland (internal)
- Biological data science (CSAMA 2025), Brixen, Italy
- Creating a website with Quarto, FMI, Switzerland (internal)
- Underlying Principles of Scientific Investigation and Their Practical Application in the Laboratory Setting, University of Basel/FMI, Switzerland
- Analysis of genomics data with R/Bioconductor, University of Basel, Switzerland
2024
- Introduction to R, University of Basel, Switzerland
- Graphical representation of data, FMI, Switzerland (internal)
- Statistical data analysis for genome scale biology (CSAMA 2024), Brixen, Italy
- Introductory/intermediate ggplot2, FMI, Switzerland (internal)
- Underlying Principles of Scientific Investigation and Their Practical Application in the Laboratory Setting, University of Basel/FMI, Switzerland
- Analysis of genomics data with R/Bioconductor, University of Basel, Switzerland
2023
- Reproducible research in computational biology (R Markdown/Quarto, git/GitHub, Snakemake), FMI, Switzerland (internal)
- Experimental design, FMI, Switzerland (internal)
- Introduction to R, University of Basel, Switzerland
- Analysis and interpretation of bulk RNA-seq data using Bioconductor, Ghent, Belgium
- Graphical representation of data, FMI, Switzerland (internal)
- Statistical data analysis for genome scale biology (CSAMA 2023), Brixen, Italy
- Introductory/intermediate ggplot2, FMI, Switzerland (internal)
- Analysis of genomics data with R/Bioconductor, University of Basel, Switzerland
2022
- Introduction to genomic data analysis with R and Bioconductor, Heidelberg, Germany
- Introduction to R, University of Basel, Switzerland
- Graphical representation of data, FMI, Switzerland (internal)
- Statistical Analysis of Genome Scale Data, Cold Spring Harbor Laboratory, USA (hybrid)
- Introduction to iSEE, FMI, Switzerland (internal)
- Statistical data analysis for genome scale biology (CSAMA 2022), Brixen, Italy
- Genomics and Transcriptomics, Integrated with Proteomics and Medical Informatics: learning the cornerstones of Systems Medicine (GTIPI 2022), Mainz, Germany
- Advanced topics in single-cell analysis, Basel, Switzerland
- Analysis of genomics data with R/Bioconductor, University of Basel, Switzerland
- Single-Cell: Transcriptomics, Spatial and Multi-Omics (sincellTE 2022), Roscoff, France (hybrid)
2021
- Experimental design, FMI, Switzerland (internal)
- RNA-seq analysis, University of Freiburg, Germany
- Introduction to R, University of Basel, Switzerland
- Summer School in Advanced topics in Single Cell Omics, online
- Introduction to iSEE, FMI, Switzerland (internal)
- Analysis of genomics data with R/Bioconductor, University of Basel, Switzerland (online)
2020
- Introduction to R, University of Basel, Switzerland (online)
- Summer School in Bioinformatics and High-Dimensional Statistics, Mainz, Germany (online)
Statistical data analysis for genome scale biology (CSAMA 2020), Brixen, Italy (cancelled due to covid-19)Bioinformatics summer school, Louvain-la-Neuve, Belgium (cancelled due to covid-19)- Advanced topics in single-cell transcriptomics, Basel, Switzerland (online)
RNA-seq analysis, University of Freiburg, Germany (postponed due to covid-19)- Analysis of genomics data with R/Bioconductor, University of Basel, Switzerland (online)
2019
- Single-cell analysis autumn school, Leysin, Switzerland
- Introduction to R, University of Basel, Switzerland
- Statistical data analysis for genome scale biology (CSAMA 2019), Brixen, Italy
- Bioinformatics summer school, Louvain-la-Neuve, Belgium
- RNA-sequence analysis, EBI, Hinxton, UK
- Analysis of genomics data with R/Bioconductor, University of Basel, Switzerland
- Microbiota Data Analysis Workshop, Zurich, Switzerland
2016
- Advanced course on edgeR and DESeq2, Leuven, Belgium
- Statistics for Life Scientists, SIB, Basel, Switzerland
- Method course - Analysis of NextGen RNA-seq data for expression profiling and protein-binding RNAs, Regensburg, Germany
- Analysis of high-throughput sequencing data, Cambridge, UK
- Statistics and computing in genome data science (CSAMA 2016), Brixen, Italy
2014
- Multivariate analysis for exploration and visualisation of biological data, SIB, Lausanne, Switzerland
- Introduction to classification, SIB, Lausanne, Switzerland
- Advanced statistics:statistical modeling, SIB, Lausanne, Switzerland
- Microarray and RNAseq data analysis with R, SIB, Fribourg, Switzerland
- RNA-seq data analysis, Brno, Czech Republic
- RNA-seq: from experiment planning to statistical data analysis, Basel, Switzerland
2013
- RNA-seq: from experiment planning to statistical data analysis, Bern, Switzerland
- Multivariate analysis for exploration and visualisation of biological data, SIB, Lausanne, Switzerland
- Advanced transcriptomics analysis, SIB, Lausanne, Switzerland
- Introduction to statistics for biologists, SIB, Lausanne, Switzerland
2012
- Integration of data from different omics, SIB, Lausanne, Switzerland
- Analysis of differential gene expression, SIB, Lausanne, Switzerland
- Multivariate analysis for exploration and visualisation of biological data, SIB, Lausanne, Switzerland
- Exploratory multivariate analysis (lecture), Lund University, Sweden
2011
- Data mining and visualization (lecture), Lund University, Sweden
2010
- Data mining and multivariate visualization methods (lecture), Lund University, Sweden
- Data mining and visualization (teaching assistant), ECMI Summer School, Milan, Italy
2006-2011
- Teaching assistant/project supervisor, Lund University, Sweden
- Linear Algebra
- Calculus in One Variable
- Calculus in Several Variables
- Mathematical Modelling
- Mathematical Communication
- Applied Mathematics - Linear Systems
- Functional Analysis and Harmonic Analysis
- Analytic Functions
- Systems and Transforms