Check that all required input files are available — checkAlevinInputFiles • alevinQC

Check that all required input files are available

checkAlevinInputFiles(baseDir)

Arguments

baseDir: Path to the output directory from the alevin run (should be the directory containing the alevin directory).

Value

Returns nothing, raises an error if any of the required files are missing.

Author

Charlotte Soneson

Examples

checkAlevinInputFiles(system.file("extdata/alevin_example_v0.14",
                                  package = "alevinQC"))
#> [1] "v0.14"