R/countsimExample_dfmat.R
countsimExample_dfmat.RdA named list with three elements, each corresponding to a (real or simulated) count data set. One of them is provided as a DESeqDataset, one as a count data frame and one as a count matrix.
countsimExample_dfmatA named list with three elements, each corresponding to a (real or simulated) count data set.
A named list with three elements, each corresponding to a (real or simulated) count data set.
The Original data set represents a subset of 10,000 genes and 11 cells
from the GSE74596 single-cell RNA-seq data set, obtained from the conquer
repository (http://imlspenticton.uzh.ch:3838/conquer/). The Sim1 and
Sim2 data sets similarly represent subsets of scRNA-seq data sets
simulated with two different simulation methods, using the real GSE74596 data
set as the basis for parameter estimation.